PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv4_092190_fzon.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 240aa    MW: 26602.2 Da    PI: 7.9048
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv4_092190_fzon.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.4e-1283130454
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         ++  rE+ RRdr+N++f eL ++l +    + +K +Ka+iL  Av+ + +L
  Bv4_092190_fzon.t1  83 SKACREKARRDRLNDKFMELGSILEPG---RTPKTDKAAILIDAVRMVTQL 130
                         5678**********************9...8***************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.57679130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.03E-882135No hitNo description
Gene3DG3DSA:4.10.280.101.8E-1383153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.4E-1083130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-1384155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-985136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MVSQENPNWL YDYSYMDEIQ ISVPDCNFAA PNSAFNNCQL QQALTVPINV SADIDGTYGD  60
SEGLKENNSK KRGRSESCAP SSSKACREKA RRDRLNDKFM ELGSILEPGR TPKTDKAAIL  120
IDAVRMVTQL RSEAQKLKDS NSSLQEKIKE LKTEKNELRD EKQRLKAEKD KLEQQLKTMN  180
TQPGYLPGPT AIPAAFAPPA QAPGGKLVPF MGYPGVAMWQ FMPPASVDTS QDHVLRPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010694263.11e-180PREDICTED: transcription factor ILR3
SwissprotQ9FH371e-109ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A0J8BEU61e-180A0A0J8BEU6_BETVU; Uncharacterized protein
STRINGVIT_19s0014g05100.t011e-117(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-100bHLH family protein